Selected software

My public-facing software projects and contributions can be found on GitHub.

🔨 {EPACmodel}

I developed an R package encoding a generic compartmental disease model as a starter to create more complex, bespoke models, in order to make my work at the Public Health Agency of Canada more efficient and reproducible.

🔗 website | repo

Companion packages: {EPACmodelpiper}, {tidygenmod}

🔨 {casteval}

I led the development of an R package to facilitate the evaluation of timeseries forecasts to make regular model performance evaluation easier on my team at the Public Health Agency of Canada.

🔗 website | repo

🔨 {ern}

I helped develop an R package that estimates the time-varying reproduction number while taking into account the quirks of real-world infectious disease data.

🔗 paper | repo